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Hi folks, Debian 504 64 bit I was following; DEBIAN PACKAGES OF R SOFTWARE http://cran.r-project.org/bin/linux/debian/README.html to add a repo $ sudo nano /etc/apt/sources.list add: Code: deb http://<favorite-cran-mirror>/bin/linux/debian lenny-cran/ at the ...
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  1. 09-01-2010 #1
    satimis
    satimis is offline
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    [SOLVED] About adding repo

    Hi folks,

    Debian 504 64 bit

    I was following;
    DEBIAN PACKAGES OF R SOFTWARE
    http://cran.r-project.org/bin/linux/debian/README.html

    to add a repo
    $ sudo nano /etc/apt/sources.list
    add:
    Code:
    deb http://<favorite-cran-mirror>/bin/linux/debian lenny-cran/
    at the bottom of the file.

    Then ran;
    $ sudo gpg --keyserver subkeys.pgp.net --recv-key 381BA480
    Code:
    gpg: WARNING: unsafe ownership on configuration file `/home/satimis/.gnupg/gpg.conf'
gpg: external program calls are disabled due to unsafe options file permissions
gpg: keyserver communications error: general error
gpg: keyserver receive failed: general error
    I also tried;
    $ sudo gpg -a --export 381BA480 > jranke_cran.asc
    Code:
    gpg: WARNING: unsafe ownership on configuration file `/home/satimis/.gnupg/gpg.conf'
gpg: WARNING: nothing exported
    What can I do here before running;
    $ sudo apt-key add jranke_cran.asc

    TIA

    B.R.
    satimis
    Last edited by satimis; 09-01-2010 at 03:49 PM. Reason: (SOLVED)
  2. 09-01-2010 #2
    jdkaye
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    Hi Satimis,
    Have you tried installing the package gui-apt-key. I've always found that quick and simple for adding new keys for additional repos.
    Have you tried running aptitude without installing the key? I aptitude will complain and ask you if you want to use the repo anyway and it will give you the key signature that it can't find so you can verify that the one in the instructions is up to date.
    cheers,
    jdk
  3. 09-01-2010 #3
    satimis
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    Quote Originally Posted by jdkaye View Post
    Hi Satimis,
    Have you tried installing the package gui-apt-key. I've always found that quick and simple for adding new keys for additional repos.
    Have you tried running aptitude without installing the key? I aptitude will complain and ask you if you want to use the repo anyway and it will give you the key signature that it can't find so you can verify that the one in the instructions is up to date.
    Hi jdk,

    $ ls -l
    Code:
    total 4
drwxr-xr-x 2 satimis satimis 4096 2010-08-30 22:12 Desktop
-rw-r--r-- 1 satimis satimis    0 2010-09-01 11:09 jranke_cran.asc

    $ su
    # aptitude update
    Code:
    .....
Reading package lists... Done             
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: GPG error: http://backports.org lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
W: You may want to run apt-get update to correct these problems

    # apt-get update
    Code:
    .....
.....
Reading package lists... Done
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: GPG error: http://backports.org lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
W: You may want to run apt-get update to correct these problems

    The same. No improvement.

    Continued


    # aptitude upgrade
    Code:
    ......
......
Reading package lists... Done
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: GPG error: http://backports.org lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
W: You may want to run apt-get update to correct these problems
deb504dk02:/home/satimisd504dk02# aptitude upgrade
W: The "upgrade" command is deprecated; use "safe-upgrade" instead.
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Reading extended state information      
Initializing package states... Done
Reading task descriptions... Done  
Resolving dependencies...
The following packages have been kept back:
  libmono-accessibility2.0-cil{a} libmono-cairo1.0-cil{a} libmono-cairo2.0-cil{a} 
  libmono-cecil-private-cil libmono-corlib1.0-cil{a} libmono-corlib2.0-cil{a} 
  libmono-data-tds1.0-cil{a} libmono-data-tds2.0-cil{a} libmono-i18n-west2.0-cil{a} 
  libmono-posix1.0-cil{a} libmono-posix2.0-cil{a} libmono-security1.0-cil{a} 
  libmono-security2.0-cil{a} libmono-sharpzip0.84-cil{a} libmono-sharpzip2.84-cil{a} 
  libmono-sqlite2.0-cil{a} libmono-system-data1.0-cil{a} libmono-system-data2.0-cil{a} 
  libmono-system-runtime2.0-cil{a} libmono-system-web1.0-cil{a} libmono-system-web2.0-cil{a} 
  libmono-system1.0-cil{a} libmono-system2.0-cil{a} libmono-webbrowser0.5-cil{a} 
  libmono-winforms2.0-cil libmono1.0-cil{a} libmono2.0-cil{a} mono-2.0-gac mono-gac 
  mono-mcs{a} monodoc-base{a} 
The following packages will be REMOVED:
  libmono-accessibility1.0-cil{u} libmono-getoptions2.0-cil{u} libmono-i18n1.0-cil{u} 
  libmono-management2.0-cil{u} libmono-peapi1.0-cil{u} libmono-peapi2.0-cil{u} 
  libmono-relaxng1.0-cil{u} libmono-sharpzip0.6-cil{u} libmono-system-runtime1.0-cil{u} 
  mono-csharp-shell{u} r-cran-vr{u} tcl8.4{u} tk8.4{u} 
0 packages upgraded, 0 newly installed, 13 to remove and 31 not upgraded.
Need to get 0B of archives. After unpacking 15.2MB will be freed.
Do you want to continue? [Y/n/?] y
Writing extended state information... Done
(Reading database ... 122104 files and directories currently installed.)
Removing libmono-accessibility1.0-cil ...
Removing libmono-getoptions2.0-cil ...
Removing libmono-i18n1.0-cil ...
Removing mono-csharp-shell ...
Removing libmono-management2.0-cil ...
Removing libmono-peapi1.0-cil ...
Removing libmono-peapi2.0-cil ...
Removing libmono-relaxng1.0-cil ...
Removing libmono-sharpzip0.6-cil ...
Removing libmono-system-runtime1.0-cil ...
Removing r-cran-vr ...
Removing tk8.4 ...
Removing tcl8.4 ...
Processing triggers for man-db ...
Processing triggers for menu ...
Reading package lists... Done             
Building dependency tree       
Reading state information... Done
Reading extended state information      
Initializing package states... Done
Writing extended state information... Done
Reading task descriptions... Done         

Current status: 31 updates [-6].

    2# aptitude update
    Code:
    Hit http://ftp.hk.debian.org lenny Release.gpg
Ign http://ftp.hk.debian.org lenny/main Translation-en_HK                                         
Hit http://security.debian.org lenny/updates Release.gpg                                          
Ign http://security.debian.org lenny/updates/main Translation-en_HK                               
Hit http://ftp.hk.debian.org lenny Release                                                        
Ign http://debian.meebey.net  Release.gpg                                                         
Ign http://debian.meebey.net  Translation-en_HK                                                   
Hit http://volatile.debian.org lenny/volatile Release.gpg                                         
Ign http://volatile.debian.org lenny/volatile/main Translation-en_HK                              
Get:1 http://backports.org lenny-backports Release.gpg [189B]                                     
Ign http://backports.org lenny-backports/main Translation-en_HK                                   
Ign http://backports.org lenny-backports/contrib Translation-en_HK                                
Hit http://security.debian.org lenny/updates Release                                              
Ign http://debian.meebey.net  Release                                                             
Ign http://security.debian.org lenny/updates/main Packages/DiffIndex                              
Ign http://backports.org lenny-backports/non-free Translation-en_HK                               
Get:2 http://mirrors.geoexpat.com lenny-cran/ Release.gpg [198B]                                  
Ign http://mirrors.geoexpat.com lenny-cran/ Translation-en_HK                                     
Hit http://backports.org lenny-backports Release                                                  
Err http://backports.org lenny-backports Release                                                  
  
Hit http://volatile.debian.org lenny/volatile Release                                             
Ign http://ftp.hk.debian.org lenny/main Packages/DiffIndex                                        
Hit http://mirrors.geoexpat.com lenny-cran/ Release                                               
Err http://mirrors.geoexpat.com lenny-cran/ Release                                               
  
Get:3 http://mirrors.geoexpat.com lenny-cran/ Release [1287B]                                     
Ign http://mirrors.geoexpat.com lenny-cran/ Release                                               
Ign http://mirrors.geoexpat.com lenny-cran/ Packages/DiffIndex                                    
Ign http://mirrors.geoexpat.com lenny-cran/ Packages                                              
Hit http://mirrors.geoexpat.com lenny-cran/ Packages                                              
Ign http://security.debian.org lenny/updates/main Sources/DiffIndex                               
Ign http://debian.meebey.net  Packages/DiffIndex                                                  
Get:4 http://backports.org lenny-backports Release [56.1kB]                                
Ign http://volatile.debian.org lenny/volatile/main Packages/DiffIndex                             
Ign http://ftp.hk.debian.org lenny/main Sources/DiffIndex                                         
Hit http://security.debian.org lenny/updates/main Packages                                        
Ign http://debian.meebey.net  Packages                                                            
Ign http://volatile.debian.org lenny/volatile/main Sources/DiffIndex                              
Hit http://security.debian.org lenny/updates/main Sources                                         
Hit http://ftp.hk.debian.org lenny/main Packages                                                  
Hit http://debian.meebey.net  Packages                                                            
Hit http://volatile.debian.org lenny/volatile/main Packages                      
Hit http://ftp.hk.debian.org lenny/main Sources                                  
Hit http://volatile.debian.org lenny/volatile/main Sources 
Ign http://backports.org lenny-backports Release           
Ign http://backports.org lenny-backports/main Packages/DiffIndex
Ign http://backports.org lenny-backports/contrib Packages/DiffIndex
Ign http://backports.org lenny-backports/non-free Packages/DiffIndex
Hit http://backports.org lenny-backports/main Packages
Hit http://backports.org lenny-backports/contrib Packages
Hit http://backports.org lenny-backports/non-free Packages
Fetched 57.7kB in 4s (12.8kB/s)
Reading package lists... Done
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: GPG error: http://backports.org lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
W: You may want to run apt-get update to correct these problems

    # apt-get update
    Code:
    Hit http://ftp.hk.debian.org lenny Release.gpg
Get:1 http://mirrors.geoexpat.com lenny-cran/ Release.gpg [198B]                                 
Ign http://mirrors.geoexpat.com lenny-cran/ Translation-en_HK                                    
Hit http://mirrors.geoexpat.com lenny-cran/ Release                                              
Err http://mirrors.geoexpat.com lenny-cran/ Release                                              
  
Get:2 http://mirrors.geoexpat.com lenny-cran/ Release [1287B]                                    
Ign http://mirrors.geoexpat.com lenny-cran/ Release                                              
Ign http://mirrors.geoexpat.com lenny-cran/ Packages/DiffIndex                                   
Ign http://mirrors.geoexpat.com lenny-cran/ Packages                                             
Hit http://mirrors.geoexpat.com lenny-cran/ Packages                                             
Ign http://ftp.hk.debian.org lenny/main Translation-en_HK                                        
Hit http://security.debian.org lenny/updates Release.gpg                                         
Ign http://security.debian.org lenny/updates/main Translation-en_HK                              
Hit http://volatile.debian.org lenny/volatile Release.gpg                                        
Ign http://volatile.debian.org lenny/volatile/main Translation-en_HK                             
Ign http://debian.meebey.net  Release.gpg                                                        
Ign http://debian.meebey.net  Translation-en_HK                                                  
Get:3 http://backports.org lenny-backports Release.gpg [189B]                                    
Ign http://backports.org lenny-backports/main Translation-en_HK                                  
Ign http://backports.org lenny-backports/contrib Translation-en_HK                               
Hit http://ftp.hk.debian.org lenny Release                                                       
Hit http://security.debian.org lenny/updates Release                                             
Hit http://volatile.debian.org lenny/volatile Release                                            
Ign http://debian.meebey.net  Release                                                            
Ign http://backports.org lenny-backports/non-free Translation-en_HK                        
Ign http://security.debian.org lenny/updates/main Packages/DiffIndex                             
Hit http://backports.org lenny-backports Release                                                 
Err http://backports.org lenny-backports Release                                                 
  
Ign http://ftp.hk.debian.org lenny/main Packages/DiffIndex                                       
Ign http://security.debian.org lenny/updates/main Sources/DiffIndex                        
Ign http://volatile.debian.org lenny/volatile/main Packages/DiffIndex                      
Ign http://debian.meebey.net  Packages/DiffIndex                                           
Get:4 http://backports.org lenny-backports Release [56.1kB]                                
Hit http://security.debian.org lenny/updates/main Packages                                       
Ign http://ftp.hk.debian.org lenny/main Sources/DiffIndex                                        
Ign http://volatile.debian.org lenny/volatile/main Sources/DiffIndex                             
Ign http://debian.meebey.net  Packages                                                           
Hit http://security.debian.org lenny/updates/main Sources                                        
Hit http://ftp.hk.debian.org lenny/main Packages                                                 
Hit http://volatile.debian.org lenny/volatile/main Packages                                      
Hit http://debian.meebey.net  Packages                                           
Hit http://ftp.hk.debian.org lenny/main Sources                                  
Hit http://volatile.debian.org lenny/volatile/main Sources                       
Ign http://backports.org lenny-backports Release           
Ign http://backports.org lenny-backports/main Packages/DiffIndex
Ign http://backports.org lenny-backports/contrib Packages/DiffIndex
Ign http://backports.org lenny-backports/non-free Packages/DiffIndex
Hit http://backports.org lenny-backports/main Packages
Hit http://backports.org lenny-backports/contrib Packages
Hit http://backports.org lenny-backports/non-free Packages
Fetched 57.7kB in 4s (12.9kB/s)
Reading package lists... Done
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: GPG error: http://backports.org lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
W: You may want to run apt-get update to correct these problems
deb504dk02:/home/satimisd504dk02# 
deb504dk02:/home/satimisd504dk02# apt-key add jranke_cran.asc
gpg: no valid OpenPGP data found.
deb504dk02:/home/satimisd504dk02# gpg --keyserver subkeys.pgp.net --recv-key 381BA480
gpg: directory `/root/.gnupg' created
gpg: new configuration file `/root/.gnupg/gpg.conf' created
gpg: WARNING: options in `/root/.gnupg/gpg.conf' are not yet active during this run
gpg: keyring `/root/.gnupg/secring.gpg' created
gpg: keyring `/root/.gnupg/pubring.gpg' created
gpg: requesting key 381BA480 from hkp server subkeys.pgp.net
gpg: keyserver timed out
gpg: keyserver receive failed: keyserver error

    # cat /etc/apt/sources.list
    Code:
    ...
deb http://ftp.hk.debian.org/debian/ lenny main
deb-src http://ftp.hk.debian.org/debian/ lenny main

deb http://security.debian.org/ lenny/updates main
deb-src http://security.debian.org/ lenny/updates main

deb http://volatile.debian.org/debian-volatile lenny/volatile main
deb-src http://volatile.debian.org/debian-volatile lenny/volatile main

deb http://backports.org/debian lenny-backports main contrib non-free
deb http://debian.meebey.net/pkg-mono /

deb http://mirrors.geoexpat.com/cran/bin/linux/debian lenny-cran/

    B.R.
    satimis
  4. 09-01-2010 #4
    jdkaye
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    Hi Satimis,
    1. I don't think it is recommended to run both aptitude and apt-get. Just choose one (the former is preferred) and stick with that.
    2. If you run gui-apt-key (as root) a window will appear (see attached image). Just copy and paste the the codes following NO_PUBKEY in the quote below into the KEY ID box in the image and then click +ADD after pasting each one.

    W: GPG error: lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
    W: GPG error: lenny-backports Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY EA8E8B2116BA136C
    cheers,
    jdk
    Attached Images Attached Images
  5. 09-01-2010 #5
    satimis
    satimis is offline
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    Quote Originally Posted by jdkaye View Post
    Hi Satimis,
    1. I don't think it is recommended to run both aptitude and apt-get. Just choose one (the former is preferred) and stick with that.
    Hi jdk,

    I ran "aptitude" all the time. Unless a warning requested to run apt-get to make correction.

    2. If you run gui-apt-key (as root) a window will appear (see attached image). Just copy and paste the the codes following NO_PUBKEY in the quote below into the KEY ID box in the image and then click +ADD after pasting each one.
    Started gui-apt-key as root

    06F90DE5381BA480 -> +Add

    Code:
    The key with ID 06F90DE5381BA480 could not be imported
    Failed

    EA8E8B2116BA136C -> +ADD

    Code:
    Key ID 0xEA8E8B2116BA136C
Fingerprint:
2703 4F81 A2EB 2840 A438  6C09 EA8E 8B21 16BA 136C

Add this key to the keyring?
-> OK
    $ sudo aptitude update
    Code:
    [sudo] password for satimis: 
Hit http://ftp.hk.debian.org lenny Release.gpg
Get:1 http://mirrors.geoexpat.com lenny-cran/ Release.gpg [198B]                                  
Ign http://mirrors.geoexpat.com lenny-cran/ Translation-en_HK                                     
Hit http://mirrors.geoexpat.com lenny-cran/ Release                                               
Err http://mirrors.geoexpat.com lenny-cran/ Release                                               
  
Get:2 http://mirrors.geoexpat.com lenny-cran/ Release [1287B]                                     
Ign http://mirrors.geoexpat.com lenny-cran/ Release                                               
Ign http://mirrors.geoexpat.com lenny-cran/ Packages/DiffIndex                                    
Ign http://mirrors.geoexpat.com lenny-cran/ Packages                                              
Hit http://mirrors.geoexpat.com lenny-cran/ Packages                                              
Ign http://ftp.hk.debian.org lenny/main Translation-en_HK                                         
Get:3 http://backports.org lenny-backports Release.gpg [189B]                                     
Ign http://backports.org lenny-backports/main Translation-en_HK                                   
Hit http://ftp.hk.debian.org lenny Release                                                        
Ign http://backports.org lenny-backports/contrib Translation-en_HK                                
Ign http://backports.org lenny-backports/non-free Translation-en_HK                               
Hit http://backports.org lenny-backports Release                                                  
Hit http://security.debian.org lenny/updates Release.gpg                                          
Ign http://security.debian.org lenny/updates/main Translation-en_HK                               
Ign http://ftp.hk.debian.org lenny/main Packages/DiffIndex                                        
Hit http://volatile.debian.org lenny/volatile Release.gpg                                         
Ign http://volatile.debian.org lenny/volatile/main Translation-en_HK                              
Ign http://backports.org lenny-backports/main Packages/DiffIndex                                  
Hit http://security.debian.org lenny/updates Release                                              
Ign http://ftp.hk.debian.org lenny/main Sources/DiffIndex                                         
Hit http://volatile.debian.org lenny/volatile Release                                             
Ign http://security.debian.org lenny/updates/main Packages/DiffIndex                              
Hit http://ftp.hk.debian.org lenny/main Packages                                                  
Ign http://security.debian.org lenny/updates/main Sources/DiffIndex                               
Ign http://volatile.debian.org lenny/volatile/main Packages/DiffIndex                             
Hit http://security.debian.org lenny/updates/main Packages                                        
Hit http://ftp.hk.debian.org lenny/main Sources                                                   
Ign http://volatile.debian.org lenny/volatile/main Sources/DiffIndex                              
Hit http://security.debian.org lenny/updates/main Sources                                         
Ign http://backports.org lenny-backports/contrib Packages/DiffIndex                               
Ign http://backports.org lenny-backports/non-free Packages/DiffIndex                              
Hit http://volatile.debian.org lenny/volatile/main Packages                                       
Hit http://backports.org lenny-backports/main Packages                      
Hit http://backports.org lenny-backports/contrib Packages                                         
Hit http://volatile.debian.org lenny/volatile/main Sources                                        
Ign http://debian.meebey.net  Release.gpg                                                         
Ign http://debian.meebey.net  Translation-en_HK
Hit http://backports.org lenny-backports/non-free Packages
Ign http://debian.meebey.net  Release
Ign http://debian.meebey.net  Packages/DiffIndex
Ign http://debian.meebey.net  Packages
Hit http://debian.meebey.net  Packages
Fetched 1674B in 5s (311B/s)
Reading package lists... Done
W: GPG error: http://mirrors.geoexpat.com lenny-cran/ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 06F90DE5381BA480
W: You may want to run apt-get update to correct these problems

    B.R.
    satimis
  6. 09-01-2010 #6
    satimis
    satimis is offline
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    Hi jdk,

    Problem solved as follow;

    As root started gui-apt-key

    Key ID [381BA480] -> OK
    Code:
    Key ID 0x381BA480
Fingerprint:
6212 B7B7 931C 4BB1 6280  BA13 06F9 0DE5 381B A480

Add this key to the keyring?
    -> OK


    $ sudo aptitude update
    ....
    No warning displayed.


    Thanks


    B.R.
    satimis
  7. 09-01-2010 #7
    jdkaye
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    My pleasure. Glad you got it sorted. You might want to mark the thread as "solved". This will help future users.
    ciao,
    jdk
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