| It means that you don't really have to do it at that stage. I would just get a stage 3 installed, change what you want, and recompile then. That is essentially the same thing. Issueing an "emerge -e system && emerge -e system && emerge -e world" would get you basically what a stage 1 would get you, and you can do it from within a gui environment so that you can surf around the forums to find a solution if you have a problem.
The Gentoo devs moved away from stage 1 and 2 because of circular dependencies and some leftover files that you don't need, and possibly some broken libs. It is recommended that you just do a stage 3 and recompile everything to get the same effect, and you won't have anything broken afterwards.
That is the way I do all of my systems anyway, since I like GCC 4.1 and I have to update everything after the install. My laptop is finishing it's compile right now.
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