You can create a home directory on a USB stick, there your settings will be saved.
On the Knoppix menu, go to Configuration => save knoppix configuration, select your USB device to save it to (important: it has to be a partition, so something like /dev/sda1, and not simply /dev/sda).
Then, insert your USB stick before booting, and at the boot prompt type: Code: knoppix myconfig=/dev/sda1
(replace sda1 with the name of the device).
you can also type: Code: knoppix myconfig=scan
Straight from my brand new Linux Cookbook, I've done some reading already  .
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