awk commas separation

[psu4]

---

Dear AWK gurus,

We have a file , "xxx.dat" like this

-50.4838 2.6147 0.0827
-49.1492 1.5374 0.1567
-48.1492 3.5374 2.0567

We try to transform them into csv format:

-50.4838,2.6147,0.0827
-49.1492,1.5374,0.1567
-48.1492,3.5374,2.0567

We have tried the followings. Both do not change the format from "xxx.dat" at all.

awk -F, '{print $1 $2 $3}' xxx.dat > xxx.csv

awk -F "\"*,\"*" '{print $1 $2 $3}' xxx.dat > xxx.csv

Could gurus tell us the reason? Thanks

[Rexilion]

Why not use sed for that?

sed 's/ /,/g' xxx.dat > xxx.csv

[Irithori]

awk works as well

awk '{ print $1 "," $2 "," $3  }' < xxx.dat > xxx.csv

However, both variants are not very resilient against malformed data.
You probably want to add some regex to ensure data integrity.

[watael]

hi,

 awk '{$1=$1}1' OFS=',' file

[psu4]

hi,

 awk '{$1=$1}1' OFS=',' file

Thanks Gurus. They work pretty well.

One more questions

We would like to print out formats like this:


91,-50.4838,2.6147,0.0827
135,-49.1492,1.5374,0.1567
138,-48.1492,3.5374,2.0567

Because this scrip is going to process many file again and again. We hope in each csv, the first line will will start with "91", the second line will start with "135", the third line starts with "138"...etc.

Here is the script

Y1='91'
Y2='135'
Y3='138'

for X in 1 2 3

do

Z="Y$X"
G=$(eval echo \$$Z)

awk '{ print "${G}", $1 "," $2 "," $3 }' < mmPBSA_e1_${time1}.dat > mmPBSA_e1_${time1}.csv


However, awk will print out something like this

${G} -50.4838,2.6147,0.0827
${G} -49.1492,1.5374,0.1567
${G} -48.1492,3.5374,2.0567


instead of

91,-50.4838,2.6147,0.0827
135,-49.1492,1.5374,0.1567
138,-48.1492,3.5374,2.0567

Could gurus kindly offer comments? Thanks.

Henry

[watael]

using eval should suggest you're doing it wrong.
you should always try to find another way. if you don't find one, try harder.

are your files always three lines?

awk 'BEGIN{ Y[1]=95; Y[2]=135; Y[3]=138 }{$1=$1; print Y[NR],$0}' OFS=',' file

[psu4]

Dear guru,

Thanks for your quick response. It works.

Not always. It might extend to N lines in the future. It's just temporarily three lines now.

Cheers,
Henry