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I'm having some unusual issues. One of my servers is a 64-bit Debian Squeeze install: Kernel: 2.6.32-5-amd64 Java: 1.7.0_09 (64-bit) - Manually installed, although I have tried the sun-java6-jre package ...
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- 10-24-2012 #1
- Join Date
- Oct 2012
Unusual memory-related problems with Java
One of my servers is a 64-bit Debian Squeeze install:
Java: 1.7.0_09 (64-bit) - Manually installed, although I have tried the sun-java6-jre package also, with the same issue.
It has 8Gb of memory and runs Apache and PHP along with a few Java applications. One of these applications is RealObjects PDFReactor, which is a PDF engine which is used to convert HTML pages to PDF documents. Recently, it's been necessary to convert very large documents and so after encountering memory limits, I've increased the amount of memory allocated to PDFReactor by passing '-Xmx1G' to the Java process. The service starts, but other processes then have issues related to memory, such as:
- PHP runs out of memory when anywhere from 512k to several megabytes have been allocated (nowhere near our memory limit)
- When running simple commands from within PHP, such as 'mkdir', I see the error 'exec(): Unable to fork [mkdir in ...]'
- PHP XSLT Processor 'parser error : out of memory error'
You would think that the server would have no memory available, but that isn't true. A typical result when running 'free -m' is:
total used free shared buffers cached Mem: 8004 7593 411 0 0 4389 -/+ buffers/cache: 3203 4801 Swap: 1905 0 1905
The problem is quite evident when trying to run Java with particular memory allocations. For example:
With 512Mb allocated
~# free -m total used free shared buffers cached Mem: 8004 7608 395 0 0 4390 -/+ buffers/cache: 3218 4786 Swap: 1905 0 1905Code:
~# java -Xms16m -Xmx512m -version java version "1.7.0_09" Java(TM) SE Runtime Environment (build 1.7.0_09-b05) Java HotSpot(TM) 64-Bit Server VM (build 23.5-b02, mixed mode)
~# java -Xms16m -Xmx1G -version Error occurred during initialization of VM Unable to allocate bit map for parallel garbage collection for the requested heap size. Error: Could not create the Java Virtual Machine. Error: A fatal exception has occurred. Program will exit.
Oddly, I have another server, with an almost identical set up (same version of Debian, same Kernel, same Java and same PDFreactor) and that installation never has issues.
Does anyone have any clue as to why these problems are occurring or what I can do to resolve them?
Last edited by sirkent; 10-24-2012 at 08:04 PM.
- 10-24-2012 #2
I ALWAYS have issues with memory when running java based servers. Particularly Confluence's wiki and ticketing system products. My personal solution is to try to stay away from java based systems as much as possible. That doesn't always work though lol.
I think you're on the right track editing the heap size. You have to find a sweet spot where you've got enough for your java applications to run correctly without stealing memory from other non-java applications. I would even try running your java applications on their own system if at all possible.
- 10-25-2012 #3
- Join Date
- Oct 2012
I have resolved the issue!
It appears to be a bug in the kernel when vm.overcommit_memory is set to 2.
This file contains the kernel virtual memory accounting mode. Values
0: heuristic overcommit (this is the default)
1: always overcommit, never check
2: always check, never overcommit
In mode 0, calls of mmap(2) with MAP_NORESERVE are not checked, and the
default check is very weak, leading to the risk of getting a process
"OOM-killed". Under Linux 2.4 any nonzero value implies mode 1. In
mode 2 (available since Linux 2.6), the total virtual address space on
the system is limited to (SS + RAM*(r/100)), where SS is the size of
the swap space, and RAM is the size of the physical memory, and r is
the contents of the file /proc/sys/vm/overcommit_ratio.
I have reset this back to '0' and now the problem has gone.